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1

Benchmarking Metagenomics Tools for Taxonomic Classification

Ye, Simon H., Siddle, Katherine J., Park, Daniel J., Sabeti, Pardis C.

Journal:

Year:

2019

Language:

english

File:

PDF, 3.14 MB

english, 2019

2

Opposing Functions of Interferon Coordinate Adaptive and Innate Immune Responses to Cancer Immune Checkpoint Blockade

Benci, Joseph L., Johnson, Lexus R., Choa, Ruth, Xu, Yuanming, Qiu, Jingya, Zhou, Zilu, Xu, Bihui, Ye, Darwin, Nathanson, Katherine L., June, Carl H., Wherry, E. John, Zhang, Nancy R., Ishwaran, Heman

Journal:

Year:

2019

Language:

english

File:

PDF, 23.36 MB

english, 2019

3

Refining Energy Levels in ReS 2 Nanosheets by LowâValent TransitionâMetal Doping for DualâBoosted Electrochemical Ammonia/Hydrogen Production

Lai, Feili, Chen, Nan, Ye, Xiaobin, He, Guanjie, Zong, Wei, Holt, Katherine B., Pan, Bicai, Parkin, Ivan P., Liu, Tianxi, Chen, Renjie

Journal:

Advanced Functional Materials

Year:

2020

Language:

english

File:

PDF, 3.18 MB

english, 2020

4

Lack of association between two key SNPs on chromosome 12p13 and ischemic stroke in Chinese Uyghur population

Yeqing Tong, Faxian Zhan, Jinjun Han, Yanwei Zhang, Xiaoxu Yin, Yijie Geng, Shuangyi Hou, Jianjun Ye, Xuhua Guan, Shenhong Han, Yunxia Wang, Katherine A. Mason, Zuxun Lu, Jiafa Liu, Jinquan Cheng

Journal:

Journal of the Neurological Sciences

Year:

2012

Language:

english

File:

PDF, 400 KB

english, 2012

5

Separation of uncompromised whole blood mixtures for single source STR profiling using fluorescently-labeled human leukocyte antigen (HLA) probes and fluorescence activated cell sorting (FACS)

Dean, Lee, Kwon, Ye Jin, Philpott, M. Katherine, Stanciu, Cristina E., Seashols-Williams, Sarah J., Dawson Cruz, Tracey, Sturgill, Jamie, Ehrhardt, Christopher J.

Journal:

Forensic Science International: Genetics

Year:

2015

Language:

english

File:

PDF, 1.35 MB

english, 2015

6

Parsing the Interferon Transcriptional Network and Its Disease Associations

Mostafavi, Sara, Yoshida, Hideyuki, Moodley, Devapregasan, LeBoité, Hugo, Rothamel, Katherine, Raj, Towfique, Ye, Chun Jimmie, Chevrier, Nicolas, Zhang, Shen-Ying, Feng, Ting, Lee, Mark, Casanova, Jea

Journal:

Year:

2016

Language:

english

File:

PDF, 5.76 MB

english, 2016

7

Survivability, Partitioning, and Recovery of Enveloped Viruses in Untreated Municipal Wastewater

Ye, Yinyin, Ellenberg, Robert M., Graham, Katherine E., Wigginton, Krista R.

Journal:

Environmental Science & Technology

Year:

2016

Language:

english

File:

PDF, 1.03 MB

english, 2016

8

Differential response of pig masseter to botulinum neurotoxin serotypes a and b

Liu, Zi-Jun, Rafferty, Katherine L., Ye, Wenmin, Herring, Susan W.

Journal:

Year:

2015

Language:

english

File:

PDF, 143 KB

english, 2015

9

Assessing distributed leadership for learning and teaching quality: a multi-institutional study

Carbone, Angela, Evans, Julia, Ross, Bella, Drew, Steve, Phelan, Liam, Lindsay, Katherine, Cottman, Caroline, Stoney, Susan, Ye, Jing

Journal:

Journal of Higher Education Policy and Management

Year:

2017

Language:

english

File:

PDF, 1.26 MB

english, 2017

10

Assessment of Mining Extent and Expansion in Myanmar Based on Freely-Available Satellite Imagery

LaJeunesse Connette, Katherine, Connette, Grant, Bernd, Asja, Phyo, Paing, Aung, Kyaw, Tun, Ye, Thein, Zaw, Horning, Ned, Leimgruber, Peter, Songer, Melissa

Journal:

Year:

2016

Language:

english

File:

PDF, 1.89 MB

english, 2016

11

TLR8-Mediated Metabolic Control of Human Treg Function: A Mechanistic Target for Cancer Immunotherapy

Li, Lingyun, Liu, Xia, Sanders, Katherine L., Edwards, James L., Ye, Jian, Si, Fusheng, Gao, Aiqin, Huang, Lan, Hsueh, Eddy C., Ford, David A., Hoft, Daniel F., Peng, Guangyong

Journal:

Cell Metabolism

Year:

2018

Language:

english

File:

PDF, 7.73 MB

english, 2018

12

Evaluation of a solid-phase extraction dual-layer carbon/primary secondary amine for clean-up of fatty acid matrix components from food extracts in multiresidue pesticide analysis

Olga Shimelis, Yuhui Yang, Katherine Stenerson, Toshiro Kaneko, Michael Ye

Journal:

Journal of Chromatography A

Year:

2007

Language:

english

File:

PDF, 207 KB

english, 2007

13

Biolistic nuclear transformation ofSaccharomyces cerevisiaeand other fungi

Daniele Armaleo, Guang-Ning Ye, Theodore M. Klein, Katherine B. Shark, John C. Sanford, Stephen Albert Johnston

Journal:

Current Genetics

Year:

1990

Language:

english

File:

PDF, 918 KB

english, 1990

14

The receptor tyrosine kinase inhibitor SU11248 impedes endothelial cell migration, tubule formation, and blood vessel formationin vivo, but has little effect on existing tumor vessels

Katherine L. Osusky, Dennis E. Hallahan, Allie Fu, Fei Ye, Yu Shyr, Ling Geng

Journal:

Year:

2004

Language:

english

File:

PDF, 404 KB

english, 2004

15

Per capita alcohol consumption and ischemic heart disease mortality in a panel of US states from 1950 to 2002

William C. Kerr, Katherine Karriker-Jaffe, Meenakshi Subbaraman, Yu Ye

Journal:

Year:

2011

Language:

english

File:

PDF, 125 KB

english, 2011

16

Alteration in glycerol and metalloid permeability by a single mutation in the extracellular C-loop of Leishmania major aquaglyceroporin LmAQP1

Nestor L. Uzcategui, Yao Zhou, Katherine Figarella, Jun Ye, Rita Mukhopadhyay, Hiranmoy Bhattacharjee

Journal:

Molecular Microbiology

Year:

2008

Language:

english

File:

PDF, 360 KB

english, 2008

17

Role of conserved non-coding DNA elements in the Foxp3 gene in regulatory T-cell fate

Zheng, Ye, Josefowicz, Steven, Chaudhry, Ashutosh, Peng, Xiao P., Forbush, Katherine, Rudensky, Alexander Y.

Journal:

Year:

2010

Language:

english

File:

PDF, 581 KB

english, 2010

18

Identification of cell surface and secreted proteins essential for tumor cell survival using a genetic suppressor element screen

Gelman, Marina S, Ye, X Katherine, Stull, Robert, Suhy, David, Jin, Liang, Ng, Dean, Than, Bruce, Ji, May, Pan, Alison, Perez, Paul

Journal:

Year:

2004

Language:

english

File:

PDF, 473 KB

english, 2004

19

Gli1 Induces G2/M Arrest and Apoptosis in Hippocampal but Not Tumor-Derived Neural Stem Cells

Katherine E. Galvin, Hong Ye, Derek J. Erstad, Rod Feddersen, Cynthia Wetmore

Journal:

Year:

2008

Language:

english

File:

PDF, 1.31 MB

english, 2008

20

Dietary Intake of Vitamin B-6, Plasma Pyridoxal 5′-Phosphate, and Homocysteine in Puerto Rican Adults

Xingwang Ye, Janice E. Maras, Peter J. Bakun, Katherine L. Tucker

Journal:

Journal of the American Dietetic Association

Year:

2010

Language:

english

File:

PDF, 300 KB

english, 2010

21

Spontaneous and induced variability of allergens in commodity crops: Ara h 2 in peanut as a case study

Peggy Ozias-Akins, M. Laura Ramos, Paola Faustinelli, Ye Chu, Soheila Maleki, Jay J. Thelen, James Huntley, Katherine Arias, Manel Jordana

Journal:

Regulatory Toxicology and Pharmacology

Year:

2009

Language:

english

File:

PDF, 359 KB

english, 2009

22

Alterations of signaling pathways in muscle tissues of patients with amyotrophic lateral sclerosis

Fei Yin, Fei Ye, Limei Tan, Katherine Liu, Zhaopeng Xuan, Jinnan Zhang, Wenhu Wang, Yanli Zhang, Xinmei Jiang, David Y. Zhang

Journal:

Year:

2012

Language:

english

File:

PDF, 527 KB

english, 2012

23

Arylstibonic acids are potent and isoform-selective inhibitors of Cdc25a and Cdc25b phosphatases

Lok Hang Mak, Jessica Knott, Katherine A. Scott, Claire Scott, Gillian F. Whyte, Yu Ye, David J. Mann, Oscar Ces, James Stivers, Rudiger Woscholski

Journal:

Bioorganic & Medicinal Chemistry

Year:

2012

Language:

english

File:

PDF, 719 KB

english, 2012

24

Botulinum toxin in masticatory muscles: Short- and long-term effects on muscle, bone, and craniofacial function in adult rabbits

Katherine L. Rafferty, Zi Jun Liu, Wenmin Ye, Alfonso L. Navarrete, Thao Tuong Nguyen, Atriya Salamati, Susan W. Herring

Journal:

Year:

2012

Language:

english

File:

PDF, 988 KB

english, 2012

25

Protection against UV-light-induced skin carcinogenesis in SKH-1 high-risk mice by sulforaphane-containing broccoli sprout extracts

Albena T. Dinkova-Kostova, Stephanie N. Jenkins, Jed W. Fahey, Lingxiang Ye, Scott L. Wehage, Karen T. Liby, Katherine K. Stephenson, Kristina L. Wade, Paul Talalay

Journal:

Year:

2006

Language:

english

File:

PDF, 230 KB

english, 2006

26

A Chemical-Genetic Approach to Studying Neurotrophin Signaling

Xi Chen, Haihong Ye, Rejji Kuruvilla, Narendrakumar Ramanan, Katherine W. Scangos, Chao Zhang, Nicolas M. Johnson, Pamela M. England, Kevan M. Shokat, David D. Ginty

Journal:

Year:

2005

Language:

english

File:

PDF, 515 KB

english, 2005

27

Differential gene induction by genetic and ligand-mediated activation of the Sonic hedgehog pathway in neural stem cells

Katherine E. Galvin, Hong Ye, Cynthia Wetmore

Journal:

Developmental Biology

Year:

2007

Language:

english

File:

PDF, 975 KB

english, 2007

28

Optimizing the duration of CPR prior to defibrillation improves the outcome of CPR in a rat model of prolonged cardiac arrest

Shijie Sun, Yinlun Weng, Xiaobo Wu, Katherine Tang, Sen Ye, Wei Chen, Max Harry Weil, Wanchun Tang

Journal:

Year:

2011

Language:

english

File:

PDF, 359 KB

english, 2011

29

Mapping of Neuropeptides in the Crustacean Stomatogastric Nervous System by Imaging Mass Spectrometry

Hui Ye, Limei Hui, Katherine Kellersberger, Lingjun Li

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2013

Language:

english

File:

PDF, 809 KB

english, 2013

30

Altered mRNA expression of telomere binding proteins (TPP1, POT1, RAP1, TRF1 and TRF2) in ulcerative colitis and Crohn's disease

Nancy Da-Silva, Ramesh Arasaradnam, Katherine Getliffe, Edward Sung, Ye Oo, Chuka Nwokolo

Journal:

Digestive and Liver Disease

Year:

2010

Language:

english

File:

PDF, 265 KB

english, 2010

31

Growth of arrays of Al-doped ZnO nanocones by pulsed laser deposition

Sun, Ye, Addison, Katherine E, Ashfold, Michael N R

Journal:

Year:

2007

Language:

english

File:

PDF, 898 KB

english, 2007

32

Botulinum neurotoxin type A in the masseter muscle: Effects on incisor eruption in rabbits

Navarrete, Alfonso L., Rafferty, Katherine L., Liu, Zi Jun, Ye, Wenmin, Greenlee, Geoffrey M., Herring, Susan W.

Journal:

American Journal of Orthodontics and Dentofacial Orthopedics

Year:

2013

Language:

english

File:

PDF, 352 KB

english, 2013

33

Early Growth Response 3 (Egr-3) Is Induced by Transforming Growth Factor-β and Regulates Fibrogenic Responses

Fang, Feng, Shangguan, Anna J., Kelly, Kathleen, Wei, Jun, Gruner, Katherine, Ye, Boping, Wang, Wenxia, Bhattacharyya, Swati, Hinchcliff, Monique E., Tourtellotte, Warren G., Varga, John

Journal:

The American Journal of Pathology

Year:

2013

Language:

english

File:

PDF, 2.50 MB

english, 2013

34

Safety, Tolerance, and Metabolism of Broccoli Sprout Glucosinolates and Isothiocyanates: A Clinical Phase I Study

Shapiro, Theresa A., Fahey, Jed W., Dinkova-Kostova, Albena T., Holtzclaw, W. David, Stephenson, Katherine K., Wade, Kristina L., Ye, Lingxiang, Talalay, Paul

Journal:

Nutrition and Cancer

Year:

2006

Language:

english

File:

PDF, 839 KB

english, 2006

35

A tailed primers protocol to identify the association of eNOS gene variable number of tandem repeats polymorphism with ischemic stroke in Chinese Han population by capillary electrophoresis

Tong, Yeqing, Yin, Xiaoxu, Wang, Zhihong, Zhan, Faxian, Zhang, Yanwei, Ye, Jianjun, Hou, Shuangyi, Geng, Yijie, Li, Yang, Guan, Xuhua, Jiang, Yongzhong, Zhang, Lingyao, Dai, Jifang, Mason, Katherine A

Journal:

Year:

2013

Language:

english

File:

PDF, 543 KB

english, 2013

36

Oligomeric Cocoa Procyanidins Possess Enhanced Bioactivity Compared to Monomeric and Polymeric Cocoa Procyanidins for Preventing the Development of Obesity, Insulin Resistance, and Impaired Glucose Tolerance during High-Fat Feeding

Dorenkott, Melanie R., Griffin, Laura E., Goodrich, Katheryn M., Thompson-Witrick, Katherine A., Fundaro, Gabrielle, Ye, Liyun, Stevens, Joseph R., Ali, Mostafa, O’Keefe, Sean F., Hulver, Matthew W.,

Journal:

Journal of Agricultural and Food Chemistry

Year:

2014

Language:

english

File:

PDF, 3.50 MB

english, 2014

37

Cervical conization of adenocarcinoma in situ: a predicting model of residual disease

Tierney, Katherine E., Lin, Paul S., Amezcua, Charles, Matsuo, Koji, Ye, Wei, Felix, Juan C., Roman, Lynda D.

Journal:

American Journal of Obstetrics and Gynecology

Year:

2014

Language:

english

File:

PDF, 224 KB

english, 2014

38

Mediterranean Diet, Healthy Eating Index 2005, and Cognitive Function in Middle-Aged and Older Puerto Rican Adults

Ye, Xingwang, Scott, Tammy, Gao, Xiang, Maras, Janice E., Bakun, Peter J., Tucker, Katherine L.

Journal:

Journal of the Academy of Nutrition and Dietetics

Year:

2013

Language:

english

File:

PDF, 742 KB

english, 2013

39

Stereotactic Body Radiation Therapy Results in Less Severe Treatment-Related Lymphopenia than Conventional Chemoradiation Therapy in Patients With Locally Advanced Pancreatic Cancer

Wild, A., Katherine, F.Y., Dholakia, A.S., Ford, E., Kumar, R., Ye, X., Tran, P.T., Grossman, S.A., Herman, J.M., Ellsworth, S.G.

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2013

Language:

english

File:

PDF, 47 KB

english, 2013

40

Effects of O 2 , Xe, and Gating on the Photoconductivity and Persistent Photoconductivity of Porphyrin Nanorods

Riley, C. Kent, Muller, Eric A., Feldman, Benjamin E., Cross, Colin M., Aken, Katherine L. Van, Johnston, Danvers E., Lu, Ye, Johnson, A. T., Paula, Julio C. de, Smith, W. F.

Journal:

The Journal of Physical Chemistry C

Year:

2010

Language:

english

File:

PDF, 3.37 MB

english, 2010

41

Role of Protein−Protein Interactions in the Function of Replication Protein A (RPA): RPA Modulates the Activity of DNA Polymerase α by Multiple Mechanisms

Braun, Katherine A., Lao, Ye, He, Zhigang, Ingles, C. James, Wold, Marc S.

Journal:

Year:

1997

Language:

english

File:

PDF, 400 KB

english, 1997

42

Second-hand drinking may increase support for alcohol policies: New results from the 2010 National Alcohol Survey

Greenfield, Thomas K., Karriker-Jaffe, Katherine J., Giesbrecht, Norman, Kerr, William C., Ye, Yu, Bond, Jason

Journal:

Drug and Alcohol Review

Year:

2014

Language:

english

File:

PDF, 152 KB

english, 2014

43

ACE2 deficiency increases NADPH-mediated oxidative stress in the kidney

Wysocki, Jan, Ortiz-Melo, David I., Mattocks, Natalie K., Xu, Katherine, Prescott, Jessica, Evora, Karla, Ye, Minghao, Sparks, Matthew A., Haque, Syed K., Batlle, Daniel, Gurley, Susan B.

Journal:

Physiological Reports

Year:

2014

Language:

english

File:

PDF, 377 KB

english, 2014

44

Cytotoxic effects of Mn(III) N -alkylpyridylporphyrins in the presence of cellular reductant, ascorbate

Ye, Xiaodong, Fels, Diane, Tovmasyan, Artak, Aird, Katherine M., Dedeugd, Casey, Allensworth, Jennifer L., Kos, Ivan, Park, Won, Spasojevic, Ivan, Devi, Gayathri R., Dewhirst, Mark W., Leong, Kam W.,

Journal:

Free Radical Research

Year:

2011

Language:

english

File:

PDF, 904 KB

english, 2011

45

The Sonic Hedgehog Signaling Pathway Maintains the Cancer Stem Cell Self-Renewal of Anaplastic Thyroid Cancer by Inducing Snail Expression

Heiden, Katherine B., Williamson, Ashley J., Doscas, Michelle E., Ye, Jin, Wang, Yimin, Liu, Dingxie, Xing, Mingzhao, Prinz, Richard A., Xu, Xiulong

Journal:

Journal of Clinical Endocrinology & Metabolism

Year:

2014

Language:

english

File:

PDF, 2.50 MB

english, 2014

46

Alternative splicing of TIA-1 in human colon cancer regulates VEGF isoform expression, angiogenesis, tumour growth and bevacizumab resistance

Hamdollah Zadeh, Maryam A., Amin, Elianna M., Hoareau-Aveilla, Coralie, Domingo, Enric, Symonds, Kirsty E., Ye, Xi, Heesom, Katherine J., Salmon, Andrew, D'Silva, Olivia, Betteridge, Kai B., Williams,

Journal:

Molecular Oncology

Year:

2015

Language:

english

File:

PDF, 2.18 MB

english, 2015

47

Analysis of Polynuclear Aromatic Hydrocarbons in Olive Oil after Solid-Phase Extraction Using a Dual-Layer Sorbent Cartridge Followed by High-Performance Liquid Chromatography with Fluorescence Detection

Stenerson, Katherine K., Shimelis, Olga, Halpenny, Michael R., Espenschied, Ken, Ye, Maochun M.

Journal:

Journal of Agricultural and Food Chemistry

Year:

2015

Language:

english

File:

PDF, 274 KB

english, 2015

48

[ACM Press the Second (2015) ACM Conference - Vancouver, BC, Canada (2015.03.14-2015.03.18)] Proceedings of the Second (2015) ACM Conference on Learning @ Scale - L@S '15 - Behavior Prediction in MOOCs using Higher Granularity Temporal Information

Ye, Cheng, Kinnebrew, John S., Biswas, Gautam, Evans, Brent J., Fisher, Douglas H., Narasimham, Gayathri, Brady, Katherine A.

Year:

2015

Language:

english

File:

PDF, 584 KB

english, 2015

49

Effect of menopause hormone therapy on disease progression in systemic lupus erythematosus: A systematic review

Khafagy, Ayatallah M., Stewart, Katherine I., Christianson, Mindy S., Tao, Ye, Blanck, Jaime F., Shen, Wen

Journal:

Year:

2015

Language:

english

File:

PDF, 526 KB

english, 2015

50

Nuclear receptor RORα regulates pathologic retinal angiogenesis by modulating SOCS3-dependent inflammation

Sun, Ye, Liu, Chi-Hsiu, SanGiovanni, John Paul, Evans, Lucy P., Tian, Katherine T., Zhang, Bing, Stahl, Andreas, Pu, William T., Kamenecka, Theodore M., Solt, Laura A., Chen, Jing

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 1.42 MB

english, 2015